A position detecting system includes: a capsule medical device having therein a magnetic field generation coil for generating a magnetic field detection coils configured to detect the magnetic field generated by the magnetic field generation coil, and to output detection signals at least one reference coil configured to detect a magnetic field and to output a detection signal, and arranged at a position where a signal-to-noise ratio to the magnetic field generated by the magnetic field generation coil is smaller than a signal-to-noise ratio in each of the detection signals detected by the detection coils and a magnetic field correction unit configured to correct magnetic field detection values based on the detection signals respectively output from the detection coils, using at least one reference magnetic field detection value that is a detection value of the magnetic field based on the detection signal output from the at least one reference coil.
