PROBLEM TO BE SOLVED: To provide an endoscope system which makes it possible to observe a subject in almost the same manner as in the case where used as illumination light is continuous spectral light using a plurality of light sources each of which independently emits light of a color different from each other, and also to provide a method of operating the endoscope system.SOLUTION: An endoscope system 10 comprises: a light source unit 20 including V-LED20a, B-LED20b, G-LED20c, and R-LED20d as light sources and emitting first multicolor spectral light 25 having a first multicolor spectrum in which the V light, B light, G light, and R light emitted from their respective light sources are superimposed; an image pickup sensor 48 having B pixels, G pixels, and R pixels; and a light source control unit 22 for controlling each of LEDs 20a-20d to establish a matching between a ratio of the light quantity integral value of each color obtained by receiving the first multicolor spectral light 25 with pixels of each color and a ratio of the light quantity integral value of each color obtained by receiving xenon lamp continuous spectral light 26 with pixels of each color.SELECTED DRAWING: Figure 2【課題】互いに異なる色の光を独立して発光する複数の光源を用いて連続スペクトル光を照明光に用いた場合とほぼ同様に観察対象を観察可能にする内視鏡システム及び内視鏡システムの作動方法を提供する。【解決手段】内視鏡システム10は、V-LED20a、B-LED20b、G-LED20c、R-LED20dを有し、これらが発光するV光、B光、G光、R光を重ね合わせた第1多色スペクトルを有する第1多色スペクトル光25を発する光源部20と、B画素、G画素、R画素を有する撮像センサ48と、各LED20a~20dを制御し、第1多色スペクトル光25を各色の画素でそれぞれ受光して得る色毎の光量積分値の比率を、キセノンランプの連続スペクトル光26を各色の画素でそれぞれ受光して得る色毎の光量積分値の比率に一致させる光源制御部22と、を備える。【選択図】図2