A method for preparation of human milk to be stored includes the steps of subjecting the human milk (M) to a treatment for inactivating or reducing an amount of biological contaminants in the human milk, freezing the human milk and forming flakes of the human milk, and collecting the frozen human milk flakes (F) in a container. This method and an according apparatus enable storing human milk for later use in a very small dose, i.e. in the form of pasteurized frozen milk flakes.