Compositions comprising a first component comprising an agriculturally acceptable complex mixture of dissolved organic material characterized by natural organic matter that is partially humified and at least one agriculturally acceptable microorganism. A method comprising contacting a seed with a first component comprising an agriculturally acceptable complex mixture of dissolved organic material characterized by natural organic matter that is partially humified and at least one agriculturally acceptable microorganism, providing enhancement of at least one of nodulation, germination, emergence, root development, and nutrient uptake compared to seed not contacted with the first component or the at least one agriculturally acceptable microorganism.