An automated system for sampling seeds generally includes an automated sampling station having a sampler configured to remove material from a seed while protecting germination viability of the seed, a seed conveyor configured to receive the seed from out of the sampling station after the material is removed from the seed, and a sample conveyor configured to receive the material removed from the seed. The sample conveyor is configured to locate the material removed from the seed in a sample container, and the seed conveyor is configured to locate the seed from which the material is removed in a seed container so as to facilitate a one-to-one correspondence between the seed and the material removed from the seed.
