张子丁，博士、教授、博士生导师，中国农业大学农业生物技术国家重点实验室研究人员，主要从事蛋白质生物信息学及计算系统生物学的教学和科研。2005.11－至今 中国农业大学生物学院，教授2002.05－2005.10 瑞士雀巢公司研究中心，生物信息学研究科学家2000.07－2002.04 瑞典Lund大学分子生物物理系，结构生物信息学博士后1990.09－2000.03 天津大学化工学院，获工学学士、硕士、博士学位

研究方向

蛋白质生物信息学及计算系统生物学

所在机构

名称：中国农业大学生物学院 邮编：100193 地址：北京海淀区圆明园西路2号

主要成就

发表文章： Selected publications in the past 5 years Zhou Y, Liu S, Song J & Zhang Z (2013) Structural propensities of human ubiquitination sites:accessibility, centrality and local conformation. PLoS ONE, 8: e83167. Chen Z, Wang Y, Zhai Y-F, Song J & Zhang Z (2013) ZincExplorer: an accurate hybrid method to improve the prediction of zinc-binding sites from protein sequences. Mol BioSyst, 9: 2213-2222. Chen Z, Zhou Y, Song J & Zhang Z (2013) hCKSAAP_UbSite: Improved prediction of human ubiquitination sites by exploiting amino acid pattern and properties. BBA - Proteins and Proteomics, 1834: 1461-1467. Dong X, Zhang Y-J & Zhang Z (2013) Using weakly conserved motifs hidden in secretion signals to identify type-III effectors from bacterial pathogen genomes. PLoS ONE, 8: e56632. Han L, Zhang Y-J, Song J, Liu MS & Zhang Z (2012) Identification of catalytic residues using a novel feature that Integrates the microenvironment and geometrical location properties of residues. PLoS ONE, 7: e41370. Li Z-G, He F, Zhang Z & Peng Y-L (2012) Prediction of protein-protein interactions between Ralstonia solanacearum and Arabidopsis thaliana. Amino Acids, 42: 2363-2371. Zhou Y, Zhou Y-S, He F, Song J & Zhang Z (2012) Can simple codon pair usage predict protein-protein interaction? Mol BioSyst, 8: 1396-1404. Zhou Y, Liu J, Han L, Li Z-G & Zhang Z (2011) Comprehensive analysis of tandem amino acid repeats from ten angiosperm genomes. BMC Genomics, 12: 632. Wang X-F, Chen Z, Wang C, Yan R-X, Zhang Z & Song J (2011) Predicting residue-residue contacts and helix-helix interactions in transmembrane proteins using an integrative feature-based random forest approach. PLoS ONE, 6: e26767. Chen Z, Chen Y-Z, Wang X-F, Wang C, Yan R-X & Zhang Z (2011) Prediction of ubiquitination sites by using the composition of k-spaced amino acid pairs. PLoS ONE, 6: e22930. Wang T-Y, He F, Hu Q-W & Zhang Z (2011) A predicted protein–protein interaction network of the filamentous fungus Neurospora crassa. Mol BioSyst,7: 2278-2285. Yan R-X, Chen Z & Zhang Z (2011) Outer membrane proteins can be simply identified using secondary structure element alignment. BMC Bioinformatics, 12: 76. He F, Zhou Y & Zhang Z (2010) Deciphering the Arabidopsis floral transition process by integrating a protein-protein interaction network and gene expression data. Plant Physiol, 153: 1492-1505. Yan R-X, Si J-N, Wang C & Zhang Z (2009) DescFold: A web server for protein fold recognition. BMC Bioinformatics, 10: 416. 承担项目及课题： 已完成国家自然科学基金青年基金1项，面上项目1项，国家“十一五”863计划生物信息与生物计算技术专题1项和教育部新世纪优秀人才资助计划1项。 正承担国家自然科学基金面上项目1项,教育部博士点基金1项。

教育背景

天津大学